STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSECRP00000011616annotation not available (191 aa)    
Predicted Functional Partners:
vcl
Vinculin.
    
 0.901
ENSECRP00000011576
annotation not available
 
      0.900
ENSECRP00000033042
annotation not available
 
      0.900
ctnnb1
Catenin beta 1.
   
 0.891
ENSECRP00000025169
annotation not available
 
      0.889
jup
Junction plakoglobin.
   
 0.872
afdn
Afadin, adherens junction formation factor.
    
 0.785
LOC114654415
Talin-1-like.
   
 0.783
tlnrd1
Talin rod domain containing 1.
   
 0.783
tln2
Talin 2.
   
 0.783
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.