STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
kiaa0825KIAA0825 ortholog. (1245 aa)    
Predicted Functional Partners:
dynlt3
Dynein light chain Tctex-type 3.
    
 0.777
dynlt1
Dynein light chain Tctex-type 1.
    
 0.777
LOC114664657
Dynein light chain Tctex-type 1-like.
    
 0.777
dync2li1
Dynein cytoplasmic 2 light intermediate chain 1.
    
 0.761
ENSECRP00000012954
annotation not available
    
 0.701
dynlrb1
Dynein light chain roadblock-type 1.
    
 0.701
ENSECRP00000015505
annotation not available
    
 0.701
dynlrb2
Dynein light chain roadblock-type 2.
    
 0.701
ENSECRP00000007761
annotation not available
    
 0.644
dnai1
Dynein axonemal intermediate chain 1.
    
 0.644
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.