STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cntfrCiliary neurotrophic factor receptor. (361 aa)    
Predicted Functional Partners:
cntf
Ciliary neurotrophic factor.
    
 0.943
LOC114654703
Interleukin-6 receptor subunit beta-like.
    
0.931
il27ra
Interleukin 27 receptor subunit alpha.
    
 0.929
lifr
LIF receptor subunit alpha.
    
 0.913
ENSECRP00000015011
annotation not available
    
 0.906
csf3r
Colony stimulating factor 3 receptor.
   
 0.904
LOC114668882
Uncharacterized LOC114668882.
     
 0.849
il12rb2
Interleukin 12 receptor subunit beta 2.
    
0.802
il11
Interleukin 11.
     
 0.752
LOC114661786
Cardiotrophin-1-like.
     
 0.743
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.