STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSECRP00000011812annotation not available (678 aa)    
Predicted Functional Partners:
ENSECRP00000011871
annotation not available
 
      0.900
gosr1
Golgi SNAP receptor complex member 1.
    
 0.585
cask
Calcium/calmodulin dependent serine protein kinase.
    
 
 0.508
ankrd33b
Ankyrin repeat domain 33B.
    
 
 0.459
mpp7
Membrane palmitoylated protein 7.
    
 
 0.459
tmem237
Transmembrane protein 237.
    
 
 0.459
mpp4
Membrane palmitoylated protein 4.
    
 
 0.459
mpp2
Membrane palmitoylated protein 2.
    
 
 0.459
mpp5
Membrane palmitoylated protein 5.
    
 
 0.459
ENSECRP00000020760
annotation not available
    
 
 0.459
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.