STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
galnt13Polypeptide N-acetylgalactosaminyltransferase 13. (557 aa)    
Predicted Functional Partners:
c1galt1c1
C1GALT1 specific chaperone 1.
     
 0.858
gcnt1
Glucosaminyl (N-acetyl) transferase 1.
     
 0.710
gcnt3
Glucosaminyl (N-acetyl) transferase 3, mucin type.
     
 0.710
ENSECRP00000023357
annotation not available
     
 0.690
b3gnt3
UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3.
     
 0.690
LOC114649201
glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1-A-like.
     
 0.675
galnt7
Polypeptide N-acetylgalactosaminyltransferase 7.
  
0.675
LOC114664969
glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1-like.
     
 0.675
LOC114654968
glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1-B-like.
     
 0.675
LOC114664599
alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1-like.
     
 0.667
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.