STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
abcg2ATP binding cassette subfamily G member 2 (Junior blood group). (713 aa)    
Predicted Functional Partners:
abcg5
ATP binding cassette subfamily G member 5.
   
0.881
abcc2
ATP binding cassette subfamily C member 2.
  
0.818
atp1b4
ATPase Na+/K+ transporting family member beta 4.
   
 
  0.775
atp1b3
ATPase Na+/K+ transporting subunit beta 3.
   
 
  0.773
atp1b1
ATPase Na+/K+ transporting subunit beta 1.
   
 
  0.772
atp4b
ATPase H+/K+ transporting subunit beta.
   
 
  0.765
atp1b2
ATPase Na+/K+ transporting subunit beta 2.
   
 
  0.730
ENSECRP00000032813
annotation not available
   
 
  0.730
LOC114667284
Apolipoprotein A-IV-like.
   
 0.709
LOC114647154
Cytochrome c oxidase assembly protein COX15 homolog.
    
 0.653
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.