STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
igsf21Immunoglobin superfamily member 21. (406 aa)    
Predicted Functional Partners:
ap2m1
Adaptor related protein complex 2 subunit mu 1.
    
  0.690
ENSECRP00000023765
annotation not available
    
  0.690
ap2a2
Adaptor related protein complex 2 subunit alpha 2.
    
  0.687
mars1
methionyl-tRNA synthetase 1.
   
 0.624
leo1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 0.622
ndufa8
NADH:ubiquinone oxidoreductase subunit A8.
    
  0.609
eci2
enoyl-CoA delta isomerase 2.
   
  0.597
acp5
Acid phosphatase 5, tartrate resistant.
   
 0.597
acp7
Acid phosphatase 7, tartrate resistant (putative).
   
 0.597
pla2g4a
Phospholipase A2 group IVA.
    
 0.585
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.