STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSECRP00000012013annotation not available (355 aa)    
Predicted Functional Partners:
ENSECRP00000011511
annotation not available
 
     0.916
ENSECRP00000011690
annotation not available
 
     0.916
ENSECRP00000011435
annotation not available
 
  
  
0.911
ENSECRP00000012116
annotation not available
 
    
0.906
ENSECRP00000011747
annotation not available
 
      0.897
ENSECRP00000011910
annotation not available
 
     
0.891
ENSECRP00000012143
annotation not available
 
     
0.889
LOC114643690
Titin-like.
 
     
0.889
ENSECRP00000011256
annotation not available
   
0.798
wdr18
WD repeat domain 18.
   
 0.787
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.