STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cdc42Cell division cycle 42. (191 aa)    
Predicted Functional Partners:
itsn2
Intersectin 2.
    
 0.998
arhgap1
Rho GTPase activating protein 1.
    
 0.990
baiap2
BAR/IMD domain containing adaptor protein 2.
   
 0.985
pak2
P21 (RAC1) activated kinase 2.
   
 0.981
pak1
P21 (RAC1) activated kinase 1.
   
 0.978
ENSECRP00000016030
annotation not available
    
 0.978
pak3
P21 (RAC1) activated kinase 3.
   
 0.978
pard6g
Par-6 family cell polarity regulator gamma.
    
 0.978
pak4
P21 (RAC1) activated kinase 4.
   
 0.977
LOC114650463
Dedicator of cytokinesis protein 9-like.
   
 0.976
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.