STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
alox5Arachidonate 5-lipoxygenase. (674 aa)    
Predicted Functional Partners:
ENSECRP00000011256
annotation not available
    
  0.735
LOC114667567
leukotriene-B(4) omega-hydroxylase 2-like.
    
 0.699
pla2g12b
Phospholipase A2 group XIIB.
    
 0.696
ptgs1
Prostaglandin-endoperoxide synthase 1.
     
 0.674
ptgs2
Prostaglandin-endoperoxide synthase 2.
     
 0.674
ltc4s
Leukotriene C4 synthase.
    
 0.671
ENSECRP00000021651
annotation not available
    
  0.671
pla2g12a
Phospholipase A2 group XIIA.
    
  0.670
lta4h
Leukotriene A4 hydrolase.
     
 0.669
pla2g4a
Phospholipase A2 group IVA.
   
 
 0.668
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.