STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pde4dPhosphodiesterase 4D. (640 aa)    
Predicted Functional Partners:
adcy9
Adenylate cyclase 9.
    
 0.875
adcy7
Adenylate cyclase 7.
    
 0.874
adcy3
Adenylate cyclase 3.
    
 0.870
adcy1
Adenylate cyclase 1.
    
 0.869
adcy8
Adenylate cyclase 8.
    
 0.869
adcy6
Adenylate cyclase 6.
    
 0.869
adcy5
Adenylate cyclase 5.
    
 0.869
adk
Adenosine kinase.
     
 0.853
ak2
Adenylate kinase 2.
     
 0.839
nt5e
5'-nucleotidase ecto.
     
 0.835
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.