STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
crebzfCREB/ATF bZIP transcription factor. (378 aa)    
Predicted Functional Partners:
nol9
Nucleolar protein 9.
   
 0.982
tex10
Testis expressed 10.
   
 0.931
wdr18
WD repeat domain 18.
   
 0.920
xrn2
5'-3' exoribonuclease 2.
    
 0.901
rrp1b
Ribosomal RNA processing 1B.
   
  0.877
rpf1
Ribosome production factor 1 homolog.
   
 
  0.865
dxo
Decapping exoribonuclease.
   
  0.862
hcfc1
Host cell factor C1.
    
 0.857
hcfc2
Host cell factor C2.
    
 0.857
ENSECRP00000024433
annotation not available
   
  0.854
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.