STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pdrg1P53 and DNA damage regulated 1. (132 aa)    
Predicted Functional Partners:
pfdn2
Prefoldin subunit 2.
    
 0.993
ENSECRP00000002897
annotation not available
    
 0.992
uxt
Ubiquitously expressed prefoldin like chaperone.
   
 0.992
ENSECRP00000014019
annotation not available
    
 0.990
uri1
URI1 prefoldin like chaperone.
    
 0.984
pfdn6
Prefoldin subunit 6.
    
 0.982
pfdn4
Prefoldin subunit 4.
    
 0.982
wdr92
WD repeat domain 92.
    
 0.978
polr2e
RNA polymerase II subunit E.
    
 0.975
ruvbl1
RuvB like AAA ATPase 1.
    
 0.970
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.