STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSECRP00000012628annotation not available (312 aa)    
Predicted Functional Partners:
ENSECRP00000012605
annotation not available
 
     0.929
snap29
Synaptosome associated protein 29.
   
 0.778
ENSECRP00000027989
annotation not available
     
 0.775
rims2
Regulating synaptic membrane exocytosis 2.
     
 0.775
vamp8
Vesicle associated membrane protein 8.
    
 0.752
bloc1s6
Biogenesis of lysosomal organelles complex 1 subunit 6.
     
 0.735
cask
Calcium/calmodulin dependent serine protein kinase.
   
 0.734
stx16
Syntaxin 16.
     
 0.732
vamp4
Vesicle associated membrane protein 4.
    
 0.721
snap25
Synaptosome associated protein 25.
   
 0.714
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.