STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tfap2cTranscription factor AP-2 gamma. (471 aa)    
Predicted Functional Partners:
LOC114653060
BTB/POZ domain-containing protein KCTD1-like.
    
 0.708
kctd15
Potassium channel tetramerization domain containing 15.
    
 0.708
LOC114644137
Uncharacterized LOC114644137.
    
 0.708
npm1
Nucleophosmin 1.
   
  0.699
wwox
WW domain containing oxidoreductase.
    
 0.698
cited2
Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2.
    
 0.683
yeats4
YEATS domain containing 4.
    
 0.680
ube2i
Ubiquitin conjugating enzyme E2 I.
    
  0.662
dek
DEK proto-oncogene.
    
 0.660
ENSECRP00000024954
annotation not available
    
 0.651
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.