STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114646785Ras-related and estrogen-regulated growth inhibitor-like protein. (222 aa)    
Predicted Functional Partners:
itsn2
Intersectin 2.
    
 0.926
itsn1
Intersectin 1.
    
 0.893
ENSECRP00000011256
annotation not available
   
 0.831
dock4
Dedicator of cytokinesis 4.
    
 0.829
met
MET proto-oncogene, receptor tyrosine kinase.
  
 0.825
ENSECRP00000022943
annotation not available
  
 0.825
ENSECRP00000017226
annotation not available
    
 0.817
ENSECRP00000017249
annotation not available
    
 0.817
LOC114657295
Carboxyl-terminal PDZ ligand of neuronal nitric oxide synthase protein-like.
    
 0.817
shank3
SH3 and multiple ankyrin repeat domains 3.
   
 0.791
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.