STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
thap12THAP domain containing 12. (749 aa)    
Predicted Functional Partners:
met
MET proto-oncogene, receptor tyrosine kinase.
    
  0.779
ENSECRP00000022943
annotation not available
    
  0.779
ptk7
Protein tyrosine kinase 7 (inactive).
    
  0.630
ENSECRP00000011256
annotation not available
    
  0.614
dnajc3
DnaJ heat shock protein family (Hsp40) member C3.
    
 0.582
LOC114661378
WD repeat-containing protein 90-like.
    
 0.558
thap7
THAP domain containing 7.
      
0.554
thap3
THAP domain containing 3.
      
0.506
sned1
Sushi, nidogen and EGF like domains 1.
    
  0.497
LOC114657163
Alpha-tectorin-like.
   
  0.493
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.