STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rapgef6Rap guanine nucleotide exchange factor 6. (1658 aa)    
Predicted Functional Partners:
rapgef2
Rap guanine nucleotide exchange factor 2.
  
 
0.941
f11r
F11 receptor.
     
 0.905
rap1b
RAP1B, member of RAS oncogene family.
    
 0.904
LOC114647779
Ras-related protein Rap-1A.
    
 0.904
magi3
Membrane associated guanylate kinase, WW and PDZ domain containing 3.
    
 0.858
magi1
Membrane associated guanylate kinase, WW and PDZ domain containing 1.
    
  0.855
LOC114660582
Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 3-like.
    
 0.849
magi2
Membrane associated guanylate kinase, WW and PDZ domain containing 2.
    
  0.830
ENSECRP00000006894
annotation not available
    
  0.830
mras
Muscle RAS oncogene homolog.
    
 0.804
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.