STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hic1HIC ZBTB transcriptional repressor 1. (747 aa)    
Predicted Functional Partners:
sirt1
Sirtuin 1.
    
 0.656
ENSECRP00000011256
annotation not available
    
  0.603
sumo1
Small ubiquitin like modifier 1.
    
  0.583
ube2i
Ubiquitin conjugating enzyme E2 I.
    
  0.561
LOC114661956
SUMO-conjugating enzyme UBC9-like.
    
  0.557
ENSECRP00000022967
annotation not available
    
  0.537
ENSECRP00000000849
annotation not available
    
  0.527
pias2
Protein inhibitor of activated STAT 2.
    
  0.470
ENSECRP00000022038
annotation not available
    
  0.470
pias1
Protein inhibitor of activated STAT 1.
    
  0.470
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.