STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
actr3Actin related protein 3. (391 aa)    
Predicted Functional Partners:
arpc2
Actin related protein 2/3 complex subunit 2.
   
 0.994
ENSECRP00000033490
annotation not available
   
 0.993
LOC114653541
Actin-related protein 2-like.
  
0.990
actr2
Actin related protein 2.
  
0.990
itsn2
Intersectin 2.
   
 
 0.982
itsn1
Intersectin 1.
     
 0.981
arpc5
Actin related protein 2/3 complex subunit 5.
   
 0.981
ENSECRP00000018844
annotation not available
   
 0.978
arpc3
Actin related protein 2/3 complex subunit 3.
   
 0.978
gpbar1
G protein-coupled bile acid receptor 1.
   
 0.978
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.