STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114660562Serine/threonine-protein kinase pim-2-like. (313 aa)    
Predicted Functional Partners:
LOC114659105
5'-AMP-activated protein kinase subunit beta-2-like.
    
 0.756
prkab1
Protein kinase AMP-activated non-catalytic subunit beta 1.
    
 0.756
prkag1
Protein kinase AMP-activated non-catalytic subunit gamma 1.
   
 0.708
prkag2
Protein kinase AMP-activated non-catalytic subunit gamma 2.
   
 0.708
LOC114655944
5'-AMP-activated protein kinase subunit gamma-1-like.
   
 0.708
camkk2
Calcium/calmodulin dependent protein kinase kinase 2.
    
0.654
camkk1
Calcium/calmodulin dependent protein kinase kinase 1.
    
0.654
rptor
Regulatory associated protein of MTOR complex 1.
    
 0.635
LOC114651930
Caltractin.
    
 0.617
cetn3
Centrin 3.
    
 0.617
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.