STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ecpasEcm29 proteasome adaptor and scaffold. (1834 aa)    
Predicted Functional Partners:
psmd14
Proteasome 26S subunit, non-ATPase 14.
   
 
 0.971
psmc3
Proteasome 26S subunit, ATPase 3.
   
 
 0.971
psmd12
Proteasome 26S subunit, non-ATPase 12.
   
 
 0.962
psmc5
Proteasome 26S subunit, ATPase 5.
   
 
 0.956
psmd8
Proteasome 26S subunit, non-ATPase 8.
    
 
 0.951
psmc6
Proteasome 26S subunit, ATPase 6.
   
 
 0.944
psmd3
Proteasome 26S subunit, non-ATPase 3.
   
 
 0.944
psmd7
Proteasome 26S subunit, non-ATPase 7.
   
 
 0.942
psmc2
Proteasome 26S subunit, ATPase 2.
   
 
 0.941
ENSECRP00000009890
annotation not available
   
 
 0.922
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.