STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pip5kl1Phosphatidylinositol-4-phosphate 5-kinase like 1. (505 aa)    
Predicted Functional Partners:
pi4ka
Phosphatidylinositol 4-kinase alpha.
   
 0.903
pi4kb
Phosphatidylinositol 4-kinase beta.
   
 0.889
plce1
Phospholipase C epsilon 1.
    
 0.876
plch2
Phospholipase C eta 2.
    
 0.876
plch1
Phospholipase C eta 1.
    
 0.876
plcl2
Phospholipase C like 2.
    
 0.876
LOC114653732
1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-1-like.
    
 0.875
plcd4
Phospholipase C delta 4.
    
 0.875
pik3cb
Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit beta.
     
 0.873
pik3cd
Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit delta.
     
 0.873
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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