STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ccdc181Coiled-coil domain containing 181. (466 aa)    
Predicted Functional Partners:
mrpl30
Mitochondrial ribosomal protein L30.
      
 0.579
hook2
Hook microtubule tethering protein 2.
      
 0.555
rassf3
Ras association domain family member 3.
      
 0.439
ENSECRP00000013582
annotation not available
      
 0.438
ENSECRP00000030711
annotation not available
      
 0.433
znf706
Zinc finger protein 706.
      
 0.428
c10h1orf112
Chromosome 10 C1orf112 homolog.
      
 0.428
rpl37
Ribosomal protein L37.
      
 0.405
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.