STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSECRP00000013406annotation not available (361 aa)    
Predicted Functional Partners:
leo1
LEO1 homolog, Paf1/RNA polymerase II complex component.
   
 0.940
rbbp4
RB binding protein 4, chromatin remodeling factor.
   
 0.873
LOC114641485
Histone-binding protein RBBP7.
   
 0.873
gatad2b
GATA zinc finger domain containing 2B.
   
 0.849
ENSECRP00000016153
annotation not available
    
 0.849
gatad2a
GATA zinc finger domain containing 2A.
   
 0.849
LOC114652263
methyl-CpG-binding domain protein 2-like.
    
 0.846
mbd3
methyl-CpG binding domain protein 3.
    
 0.846
hdac1
Histone deacetylase 1.
   
 0.831
hdac2
Histone deacetylase 2.
   
 0.821
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.