STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSECRP00000013567annotation not available (238 aa)    
Predicted Functional Partners:
psma5
Proteasome 20S subunit alpha 5.
   
0.998
psmb1
Proteasome 20S subunit beta 1.
   
 0.998
ENSECRP00000005387
annotation not available
   
 0.998
psmb4
Proteasome 20S subunit beta 4.
   
 0.998
psmb2
Proteasome 20S subunit beta 2.
   
 0.998
psma2
Proteasome 20S subunit alpha 2.
   
0.998
psmb3
Proteasome 20S subunit beta 3.
   
 0.998
psma4
Proteasome 20S subunit alpha 4.
   
0.998
psmd14
Proteasome 26S subunit, non-ATPase 14.
   
 0.996
psmc6
Proteasome 26S subunit, ATPase 6.
  
 0.996
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.