STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114659330ADP-ribosylation factor 1-like. (184 aa)    
Predicted Functional Partners:
itsn2
Intersectin 2.
    
 0.926
itsn1
Intersectin 1.
    
 0.893
copg2
Coatomer protein complex subunit gamma 2.
    
 0.852
arfgap1
ADP ribosylation factor GTPase activating protein 1.
   
 0.836
ENSECRP00000011256
annotation not available
   
 0.831
copb1
Coatomer protein complex subunit beta 1.
   
 0.830
pi4kb
Phosphatidylinositol 4-kinase beta.
    
 0.790
cyfip2
Cytoplasmic FMR1 interacting protein 2.
    
  0.779
cyfip1
Cytoplasmic FMR1 interacting protein 1.
    
  0.778
gbf1
Golgi brefeldin A resistant guanine nucleotide exchange factor 1.
    
 0.778
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.