STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114659630Plasma protease C1 inhibitor-like. (930 aa)    
Predicted Functional Partners:
LOC114656898
Complement C1q subcomponent subunit B-like.
   
 0.884
LOC114647755
Mannose-binding protein C-like.
     
 0.864
ENSECRP00000005269
annotation not available
     
 0.856
LOC114656897
Complement C1q subcomponent subunit C-like.
   
 0.854
LOC114656899
Complement C1q subcomponent subunit C-like.
    
 0.840
LOC114657948
Complement C1r-A subcomponent-like.
  
 0.815
hgfac
HGF activator.
   
 0.742
ENSECRP00000008917
annotation not available
  
 0.740
LOC114657949
Complement C1r subcomponent-like.
  
 0.740
c1s
Complement C1s.
  
 0.740
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.