STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114659638N-acyl-aromatic-L-amino acid amidohydrolase (carboxylate-forming)-like. (320 aa)    
Predicted Functional Partners:
skp1
S-phase kinase associated protein 1.
    
 0.878
cdc6
Cell division cycle 6.
    
 0.817
rnf7
Ring finger protein 7.
    
 0.809
rbx1
Ring-box 1.
    
 0.809
nat8l
N-acetyltransferase 8 like.
   
 
 0.803
nudt12
Nudix hydrolase 12.
    
  0.790
mrpl2
Mitochondrial ribosomal protein L2.
    
 0.784
cul1
Cullin 1.
    
 0.757
cul3
Cullin 3.
    
 0.757
cacul1
CDK2 associated cullin domain 1.
    
 0.757
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.