STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC11466027215-hydroxyprostaglandin dehydrogenase [NAD(+)]-like. (266 aa)    
Predicted Functional Partners:
hsdl2
Hydroxysteroid dehydrogenase like 2.
  
 0.860
aldh7a1
Aldehyde dehydrogenase 7 family member A1.
  
 0.763
LOC114648548
Cytochrome b5 reductase 4.
  
 0.762
echs1
enoyl-CoA hydratase, short chain 1.
   
 0.753
hadha
hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit alpha.
   
 0.751
hibch
3-hydroxyisobutyryl-CoA hydrolase.
   
 0.751
acox3
acyl-CoA oxidase 3, pristanoyl.
  
 0.736
acox1
acyl-CoA oxidase 1.
  
 0.736
oxsm
3-oxoacyl-ACP synthase, mitochondrial.
  
 0.729
oxct1
3-oxoacid CoA-transferase 1.
  
 0.726
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.