STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114658021Oxidized low-density lipoprotein receptor 1-like. (446 aa)    
Predicted Functional Partners:
LOC114667991
TYRO protein tyrosine kinase-binding protein-like.
    
  0.513
ENSECRP00000002874
annotation not available
    
  0.505
ENSECRP00000012278
annotation not available
    
  0.505
tnn
Tenascin N.
    
  0.505
tnr
Tenascin R.
    
  0.505
tnc
Tenascin C.
    
  0.505
ENSECRP00000027622
annotation not available
    
  0.505
hapln1
Hyaluronan and proteoglycan link protein 1.
    
  0.477
ENSECRP00000000942
annotation not available
    
  0.456
fcer1g
Fc fragment of IgE receptor Ig.
   
  0.456
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.