STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pqbp1Polyglutamine binding protein 1. (194 aa)    
Predicted Functional Partners:
txnl4a
Thioredoxin like 4A.
   
 0.984
txnl4b
Thioredoxin like 4B.
   
 0.955
ENSECRP00000014031
annotation not available
    
 0.917
ENSECRP00000014048
annotation not available
    
 0.917
cd2bp2
CD2 cytoplasmic tail binding protein 2.
    
 
 0.735
ctnnbl1
Catenin beta like 1.
   
 
  0.728
wbp4
WW domain binding protein 4.
     
 0.722
ubl5
Ubiquitin like 5.
   
  0.716
alyref
Aly/REF export factor.
    
  0.707
zmat2
Zinc finger matrin-type 2.
   
 
 0.687
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.