STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
timm10Translocase of inner mitochondrial membrane 10. (90 aa)    
Predicted Functional Partners:
timm8a
Translocase of inner mitochondrial membrane 8A.
   
 0.999
timm9
Translocase of inner mitochondrial membrane 9.
   
 0.999
timm13
Translocase of inner mitochondrial membrane 13.
   
 0.999
timm22
Translocase of inner mitochondrial membrane 22.
   
 0.998
timm29
Translocase of inner mitochondrial membrane 29.
   
 0.996
ENSECRP00000028322
annotation not available
   
 0.996
agk
Acylglycerol kinase.
    
 0.994
ENSECRP00000005620
annotation not available
   
 0.993
ENSECRP00000011333
annotation not available
   
 0.993
cactin
Cactin, spliceosome C complex subunit.
   
 0.983
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.