STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mki67Marker of proliferation Ki-67. (2820 aa)    
Predicted Functional Partners:
apaf1
Apoptotic peptidase activating factor 1.
   
 0.801
pold2
DNA polymerase delta 2, accessory subunit.
    
 0.770
fancm
FA complementation group M.
    
 0.765
arid4a
AT-rich interaction domain 4A.
    
 0.756
arid4b
AT-rich interaction domain 4B.
    
 0.756
pold1
DNA polymerase delta 1, catalytic subunit.
   
 0.754
smn1
Survival of motor neuron 1, telomeric.
    
 0.748
snrpd2
Small nuclear ribonucleoprotein D2 polypeptide.
   
 0.736
snrpe
Small nuclear ribonucleoprotein polypeptide E.
   
 0.723
LOC114648872
Proliferating cell nuclear antigen.
   
  0.712
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.