STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSECRP00000014655annotation not available (100 aa)    
Predicted Functional Partners:
LOC114647339
Ubiquitin-conjugating enzyme E2 variant 3-like.
    
 0.990
vps28
VPS28 subunit of ESCRT-I.
   
 0.976
tsg101
Tumor susceptibility 101.
    
 0.959
tm9sf1
Transmembrane 9 superfamily member 1.
    
 0.939
ENSECRP00000018241
annotation not available
    
 0.939
vps37a
VPS37A subunit of ESCRT-I.
   
 0.893
LOC114655886
Vacuolar protein sorting-associated protein 37D-like.
   
 0.893
vps37c
VPS37C subunit of ESCRT-I.
   
 0.893
vps25
Vacuolar protein sorting 25 homolog.
    
 0.886
vps36
Vacuolar protein sorting 36 homolog.
     
 0.859
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.