STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
clcn5Chloride voltage-gated channel 5. (811 aa)    
Predicted Functional Partners:
ostm1
Osteoclastogenesis associated transmembrane protein 1.
    
 0.760
lats2
Large tumor suppressor kinase 2.
    
 0.677
lats1
Large tumor suppressor kinase 1.
    
 0.677
ptpn14
Protein tyrosine phosphatase non-receptor type 14.
    
 
 0.589
LOC114655673
Merlin-like.
     
 0.566
nf2
Neurofibromin 2.
     
 0.566
frmd6
FERM domain containing 6.
     
 0.547
LOC114665659
FERM domain-containing protein 6-like.
     
 0.547
ENSECRP00000000849
annotation not available
    
  0.495
ak3
Adenylate kinase 3.
    
  0.495
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.