STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114648968Diamine acetyltransferase 1-like. (178 aa)    
Predicted Functional Partners:
LOC114651172
Probable bifunctional dTTP/UTP pyrophosphatase/methyltransferase protein.
    
 0.900
sat1
Spermidine/spermine N1-acetyltransferase 1.
  
 
0.835
odc1
Ornithine decarboxylase 1.
    
 0.759
agmat
Agmatinase.
  
 
 0.749
srm
Spermidine synthase.
    
 0.733
LOC114645040
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1-like.
  
 0.718
gfpt2
Glutamine-fructose-6-phosphate transaminase 2.
  
 0.718
azin1
Antizyme inhibitor 1.
    
 0.710
LOC114655413
Probable flavin-containing monoamine oxidase A.
    
 0.709
LOC114650247
Amine oxidase [flavin-containing]-like.
    
 0.709
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.