STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
erich2Glutamate rich 2. (390 aa)    
Predicted Functional Partners:
aldh18a1
Aldehyde dehydrogenase 18 family member A1.
    
 0.894
eprs1
glutamyl-prolyl-tRNA synthetase 1.
    
 0.881
LOC114648548
Cytochrome b5 reductase 4.
   
 
  0.835
abat
4-aminobutyrate aminotransferase.
  
 0.756
glud1
Glutamate dehydrogenase 1.
  
 
 0.707
aldh5a1
Aldehyde dehydrogenase 5 family member A1.
  
 0.706
sdha
Succinate dehydrogenase complex flavoprotein subunit A.
   
 0.696
agxt2
Alanine--glyoxylate aminotransferase 2.
  
 0.694
LOC114660415
5-phosphohydroxy-L-lysine phospho-lyase-like.
  
 0.694
etnppl
Ethanolamine-phosphate phospho-lyase.
  
 0.694
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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