STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cbr4Carbonyl reductase 4. (243 aa)    
Predicted Functional Partners:
hsd17b8
Hydroxysteroid 17-beta dehydrogenase 8.
  
 
0.993
oxsm
3-oxoacyl-ACP synthase, mitochondrial.
 0.974
mcat
malonyl-CoA-acyl carrier protein transacylase.
  
 0.935
fasn
Fatty acid synthase.
   
 0.890
LOC114649688
Dehydrogenase/reductase SDR family member 4-like.
  
 
0.874
LOC114645860
Dehydrogenase/reductase SDR family member 4-like.
  
 
0.872
oxct1
3-oxoacid CoA-transferase 1.
  
 0.869
ENSECRP00000011543
annotation not available
  
 0.866
sugct
succinyl-CoA:glutarate-CoA transferase.
   
 0.862
LOC114653154
Phthiocerol/phenolphthiocerol synthesis polyketide synthase type I PpsD-like.
   
 0.777
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.