STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pdxpPyridoxal phosphatase. (308 aa)    
Predicted Functional Partners:
pdxk
Pyridoxal kinase.
    
 0.897
pnpo
Pyridoxamine 5'-phosphate oxidase.
  
 
 0.895
ENSECRP00000004184
annotation not available
  
 
 0.889
aox1
Aldehyde oxidase 1.
     
 0.820
ENSECRP00000029264
annotation not available
     
 0.820
hao2
Hydroxyacid oxidase 2.
  
 
 0.741
hao1
Hydroxyacid oxidase 1.
  
 
 0.741
atp5pb
ATP synthase peripheral stalk-membrane subunit b.
   
 
 0.724
ENSECRP00000011560
annotation not available
    
 0.709
dhrs11
Dehydrogenase/reductase 11.
    
 0.709
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.