STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114649553Claudin-15-like. (111 aa)    
Predicted Functional Partners:
ENSECRP00000028187
annotation not available
  
  
 0.892
tjp1
Tight junction protein 1.
    
 0.877
tjp3
Tight junction protein 3.
    
 0.873
ENSECRP00000010690
annotation not available
     
 0.854
cldn2
Claudin 2.
  
  
0.853
ENSECRP00000016081
annotation not available
  
  
 
0.851
LOC114655684
Claudin-3-like.
  
 
 
0.850
LOC114661596
Claudin-4-like.
  
  
 
0.850
LOC114655685
Claudin-3-like.
  
 
 
0.848
LOC114646713
Claudin-1-like.
  
  
 
0.847
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.