STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC11465950314-3-3 protein beta/alpha. (244 aa)    
Predicted Functional Partners:
cdc25b
Cell division cycle 25B.
    
 0.930
braf
B-Raf proto-oncogene, serine/threonine kinase.
   
 0.925
LOC114660611
Serine/threonine-protein kinase A-Raf-like.
   
 0.925
raf1
Raf-1 proto-oncogene, serine/threonine kinase.
   
 0.925
ywhae
Tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein epsilon.
  
0.898
cdc25c
Cell division cycle 25C.
    
 0.881
bad
BCL2 associated agonist of cell death.
    
 0.876
wwtr1
WW domain containing transcription regulator 1.
    
 0.866
yap1
Yes associated protein 1.
    
 0.866
ccnb3
Cyclin B3.
    
 0.856
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.