STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pold4DNA polymerase delta 4, accessory subunit. (121 aa)    
Predicted Functional Partners:
pold2
DNA polymerase delta 2, accessory subunit.
     
 0.968
pold1
DNA polymerase delta 1, catalytic subunit.
    
 0.965
pola2
DNA polymerase alpha 2, accessory subunit.
     
 0.956
pole
DNA polymerase epsilon, catalytic subunit.
    
 0.955
pola1
DNA polymerase alpha 1, catalytic subunit.
    
 0.953
rev3l
REV3 like, DNA directed polymerase zeta catalytic subunit.
    
 0.953
prim2
DNA primase subunit 2.
     
 0.951
polg
DNA polymerase gamma, catalytic subunit.
     
 0.938
pold3
DNA polymerase delta 3, accessory subunit.
     
 0.935
pole3
DNA polymerase epsilon 3, accessory subunit.
     
 0.933
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.