STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114660996Store-operated calcium entry regulator STIMATE-like. (284 aa)    
Predicted Functional Partners:
ENSECRP00000011256
annotation not available
    
 0.904
met
MET proto-oncogene, receptor tyrosine kinase.
    
 0.775
ENSECRP00000022943
annotation not available
    
 0.775
itsn2
Intersectin 2.
   
 0.708
mib2
Mindbomb E3 ubiquitin protein ligase 2.
   
 0.685
cd247
CD247 molecule.
   
 0.677
traf7
TNF receptor associated factor 7.
    
 0.673
epor
Erythropoietin receptor.
    
 0.658
inppl1
Inositol polyphosphate phosphatase like 1.
    
  0.656
LOC114662388
Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 2B-like.
    
  0.656
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.