STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSECRP00000015191annotation not available (149 aa)    
Predicted Functional Partners:
mysm1
Myb like, SWIRM and MPN domains 1.
    
  0.870
kdm6b
Lysine demethylase 6B.
    
  0.743
kdm6a
Lysine demethylase 6A.
    
  0.743
rps27a
Ribosomal protein S27a.
   
  0.712
tp53bp1
Tumor protein p53 binding protein 1.
    
 0.693
LOC114662601
Polyubiquitin-like.
    
  0.690
polr2c
RNA polymerase II subunit C.
    
 0.690
polr2e
RNA polymerase II subunit E.
    
  0.686
polr2k
RNA polymerase II subunit K.
    
  0.685
rbbp5
RB binding protein 5, histone lysine methyltransferase complex subunit.
    
  0.683
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.