STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
csCitrate synthase. (468 aa)    
Predicted Functional Partners:
sdhb
Succinate dehydrogenase complex iron sulfur subunit B.
  
 0.997
aco2
Aconitase 2.
  
 0.996
acly
ATP citrate lyase.
  
 0.996
aco1
Aconitase 1.
  
 0.995
mdh2
Malate dehydrogenase 2.
  
 0.994
sdha
Succinate dehydrogenase complex flavoprotein subunit A.
  
 0.994
suclg1
succinate-CoA ligase alpha subunit.
  
 0.993
sucla2
succinate-CoA ligase ADP-forming beta subunit.
  
 0.992
dlat
Dihydrolipoamide S-acetyltransferase.
  
 0.990
dlst
Dihydrolipoamide S-succinyltransferase.
  
 0.990
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.