STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mcoln2Mucolipin 2. (551 aa)    
Predicted Functional Partners:
LOC114642354
Mucolipin-1-like.
  
  
 
0.839
mcoln3
Mucolipin 3.
  
  
 
0.831
ENSECRP00000011043
annotation not available
     
 0.703
LOC114655300
Transient receptor potential cation channel subfamily M member 2-like.
     
 0.703
trpa1
Transient receptor potential cation channel subfamily A member 1.
     
 0.580
trpm5
Transient receptor potential cation channel subfamily M member 5.
     
 0.478
trpm3
Transient receptor potential cation channel subfamily M member 3.
     
 0.471
trpm6
Transient receptor potential cation channel subfamily M member 6.
     
 0.471
LOC114660707
Transient receptor potential cation channel subfamily M member 4-like.
     
 0.471
trpm1
Transient receptor potential cation channel subfamily M member 1.
     
 0.471
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.