STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
vps37cVPS37C subunit of ESCRT-I. (324 aa)    
Predicted Functional Partners:
vps28
VPS28 subunit of ESCRT-I.
    
 0.994
tsg101
Tumor susceptibility 101.
    
 0.993
LOC114647339
Ubiquitin-conjugating enzyme E2 variant 3-like.
    
 0.989
mvb12a
Multivesicular body subunit 12A.
   
 0.989
mvb12b
Multivesicular body subunit 12B.
   
 0.986
vps25
Vacuolar protein sorting 25 homolog.
    
 0.967
vps36
Vacuolar protein sorting 36 homolog.
     
 0.959
snf8
SNF8 subunit of ESCRT-II.
     
 0.959
chmp2a
Charged multivesicular body protein 2A.
    
 0.958
LOC114651694-2
Charged multivesicular body protein 3.
     
 0.957
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.