STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114659407Annexin A13-like. (316 aa)    
Predicted Functional Partners:
anxa2
Annexin A2.
  
0.654
anxa1
Annexin A1.
  
0.648
svep1
Sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1.
    
  0.569
LOC114647908
E-selectin-like.
    
  0.569
trio
Trio Rho guanine nucleotide exchange factor.
    
  0.562
LOC114652087
Collagen alpha-1(I) chain-like.
    
  0.562
stxbp1
Syntaxin binding protein 1.
   
 0.519
ENSECRP00000002974
annotation not available
    
 0.514
cstf2
Cleavage stimulation factor subunit 2.
    
 0.514
stxbp2
Syntaxin binding protein 2.
    
 0.514
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.