STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hnrnpul2Heterogeneous nuclear ribonucleoprotein U like 2. (834 aa)    
Predicted Functional Partners:
tep1
Telomerase associated protein 1.
    
 0.934
tep1-2
Telomerase associated protein 1.
    
 0.934
hnrnpm
Heterogeneous nuclear ribonucleoprotein M.
   
 0.900
hnrnpk
Heterogeneous nuclear ribonucleoprotein K.
   
 0.889
dhx9
DExH-box helicase 9.
   
 0.874
LOC114645737
Heterogeneous nuclear ribonucleoprotein C-like.
   
 0.842
srsf1
Serine and arginine rich splicing factor 1.
   
 0.808
gnl3l
G protein nucleolar 3 like.
    
 0.796
polr2a
RNA polymerase II subunit A.
   
  0.777
snrpd3
Small nuclear ribonucleoprotein D3 polypeptide.
   
  0.768
Your Current Organism:
Erpetoichthys calabaricus
NCBI taxonomy Id: 27687
Other names: Calamoichthys calabaricus, E. calabaricus, reedfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.